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Post Graduate Certificate Course on Infectious Disease Modelling
Curriculum
7 Sections
59 Lessons
8 Weeks
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Week 1 Introduction to Infectious Disease Epidemiology
12
1.1
Week 1 Introduction to Infectious Disease Epidemiology
1.2
1.1Introduction to IDM
1.3
1.2 Introduction to IDM
1.4
1.3 History & Spread of Pandemics
1.5
1.4 Serosurveys in IDM
1.6
1.5 Contact studies in IDM
1.7
1.6 Introduction to mathematical models
1.8
1.7 Introduction to SIR Model
1.9
R1.1 Glossary of terms_ID Modelling
1.10
R1.2 History of pandemics
1.11
R1.3 Contact Patterns
1.12
R1.4 Sero-Survey and sero-epidemiology
Week 2 Introduction to SIR Model
8
2.1
2.1 Difference equations
2.2
2.2 Differential equations_1
2.3
2.3 Differential equations_2
2.4
Exercise 1
2.5
Assignment 1
2.6
R2.1 Herd immunity
2.7
R2.2 Modelling infectious disease
2.8
Exercise 1_solution
Week 3 Math and Excel basics
11
3.1
3.1 Excel interface
3.2
3.2 Excel_data entry and formatting
3.3
3.3 Excel_formulas and functions
3.4
3.4 Excel_absolute referencing
3.5
3.5 Autofill_filter
3.6
3.6 Excel_line_graph
3.7
3.7 Math basics
3.8
3.8 Matrices
3.9
Exercise 2A
3.10
Influenza_SEIR_Exercise 2B
3.11
Exercise 2_solution
Week 4 Running compartmental models in Excel
9
4.1
4.1 Choosing the right model
4.2
4.2 COVID-19_Example
4.3
4.3 Other models
4.4
4.4 Introducing births & deaths_1
4.5
4.5 Introducing births & deaths_2
4.6
4.6 Exercise 3 Solution
4.7
3A Exercise 3
4.8
3B births_deaths
4.9
3C births_deaths_solution
Week 5 Calculation of R0 & Effect of Vaccination
11
5.1
5.1 Growth rate
5.2
5.2 Reproduction number
5.3
5.3 Effect of Vaccination
5.4
Exercise_4_R0
5.5
Exercise 4_R0_solution
5.6
Exercise 5
5.7
Exercise 5_solution
5.8
Exercise 5_solution_video
5.9
Exercise 6
5.10
Exercise 6_solution
5.11
Exercise 6_solution_Video
Week 6 Long term dynamics of acute infections
4
6.1
6.1 Long term dynamics of acute infections
6.2
Exercise 7
6.3
Exercise 7_solution
6.4
Exercise 7_solution_video
Week 7 Effect of control measures and interventions
4
7.1
7.1 Effect of control measures and interventions 1
7.2
7.2 Effect of control measures and interventions 2
7.3
7.3 Incorporating non-random mixing 1
7.4
7.4 Incorporating non-random mixing 2
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